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Davis, D, Banks S, Birtles A, Valentine P, Cuthill M.  1997.  Whale sharks in Ningaloo Marine Park: Managing tourism in an Australian marine protected area. Tourism Management. 18(5):259-271. Abstract
Little, LR, Thebaud O, Boschetti F, McDonald AD, Marriott R, Wise B, Lenanton R.  2011.  WAMSI 3.2.3 final report: An evaluation of management strategies for line fishing in the Ningaloo Marine Park. :1-118. Download: WAMSI 3.2.3 final report.pdf (1.2 MB)
Pillans, R, Babcock R, Patterson T, How J, Hyndes G.  2009.  WAMSI 3.2.2e final report: Adequacy of zoning in the Ningaloo Marine Park. :1-83. Download: WAMSI 3.2.2e final report.pdf (7.99 MB)
Babcock, R, Haywood M, Vanderklift M, Murphy N, Clapin G, Limbourn A, Kozak D, Thomson D, McCleod I, Milton D et al..  2009.  WAMSI 3.2.2d final report: Lagoon invertebrates final report and monitoring recommendations. :1-40. Download: WAMSI 3.2.2d final report.pdf (545.34 KB)
Black, R, Johnson MS, Prince J, Brearley A.  2011.  WAMSI 3.2.2b final report: Diversity, abundance and distribution of intertidal invertebrate species in the Ningaloo Marine Park. :1-452. Download: WAMSI 3.2.2b final report.pdf (7.19 MB)
Babcock, R, Haywood M, Vanderklift M, Claplin G, Kleczkowski M, Dennis D, Skewes T, Milton D, Murphy N, Pillans R et al..  2008.  WAMSI 3.2.2a final report: Ecosystem impacts of human usage and the effectiveness of zoning for biodiversity conservation: Broad-scale fish census. :1-99. Download: WAMSI 3.2.2a final report.pdf (2.72 MB)
Meekan, M, Speed C, Planes S, McLean C, Bradshaw C.  2008.  WAMSI 3.1.4 final report: Population monitoring protocols for whale sharks (Rhincodon typus). :1-195. Download: WAMSI 3.1.4 final report.pdf (5.79 MB)
Depczynski, M, Heyward A, Radford B, O'Leary R, Babcock R, Haywood M, Thomson D.  2009.  WAMSI 3.1.3 final report: Stock assessment of targeted invertebrates at Ningaloo Reef. :1-108. Download: WAMSI 3.1.3 final report.pdf (2.3 MB)
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BERRY, OLIVER, ENGLAND PHILLIP, MARRIOTT ROSSJ, BURRIDGE CHRISTOPHERP, NEWMAN STEPHENJ.  2012.  Understanding age-specific dispersal in fishes through hydrodynamic modelling, genetic simulations and microsatellite DNA analysis. Molecular Ecology. 21(9):2145-2159. Abstract
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Stepien, A, Blazewicz-Paszkowycz M.  2009.  Two new species of the genus Tanzanapseudes Băcescu, 1975 (Tanaidacea: Apseudomorpha: Tanzanapseudidae) from mid-west Australia. Zootaxa. 2283:40-50. Abstract
Speed, CW, Meekan MG, Field IC, McMahon CR, Abrantes K, Bradshaw CJA.  2012.  Trophic ecology of reef sharks determined using stable isotopes and telemetry. Coral Reefs. 31(2):357-367. Abstract
Sleeman, JC, Meekan MG, Wilson SG, Polovina JJ, Stevens JD, Boggs GS, Bradshaw CJA.  2010.  To go or not to go with the flow: Environmental influences on whale shark movement patterns. Journal of Experimental Marine Biology and Ecology. 390(2):84-98. Abstract
Downie, AJ, Bray RA, Jones BEH, Cribb TH.  2011.  Taxonomy, host-specificity and biogeography of Symmetrovesicula Yamaguti, 1938 (Digenea: Fellodistomidae) from chaetodontids (Teleostei: Perciformes) in the tropical Indo-west Pacific region. Systematic Parasitology. 78(1):1-18. Abstract
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Beckley, LE, Lombard AT.  2012.  A systematic evaluation of the incremental protection of broad-scale habitats at Ningaloo Reef, Western Australia. Marine and Freshwater Research. 63(1):17-22. Abstract
James, NP, Collins LB, Bone Y, Hallock P.  1999.  Subtropical carbonates in a temperate realm; modern sediments on the Southwest Australian shelf. Journal of Sedimentary Research. 69(6):1297-1321. Abstract
Nichol, SL, Anderson TJ, Battershill C, Brooke BP.  2012.  Submerged Reefs and Aeolian Dunes as Inherited Habitats, Point Cloates, Carnarvon Shelf, Western Australia. Seafloor Geomorphology as Benthic Habitat. :397-407. Abstract
Bray, RA, Cribb TH.  2004.  Stephanostomum tantabiddii n. sp. (Digenea: Acanthocolpidae) from Carangoides fulvoguttatus (Forsskal, 1775) (Perciformes: Carangidae) from Ningaloo Reef, Western Australia. Zootaxa. 457:1-8. Abstract
Bray, RA, Cribb TH.  2006.  Stephanostomum talakitok n. sp. (Digenea: Acanthocolpidae) from the golden trevalley, Gnathanodon speciosus (Perciformes: Carangidae), from Ningaloo Reef, Western Australia. Zootaxa. 1104:59-68. Abstract
Smallwood, CB, Beckley LE.  2012.  Spatial distribution and zoning compliance of recreational fishing in Ningaloo Marine Park, north-western Australia. Fisheries Research. 125-126:40-50. Abstract
Smallwood, CB.  2009.  Spatial and temporal patterns of recreational use at Ningaloo Reef, north-western Australia. School of Environmental Science. Doctor of Philosophy:1-316. Abstract  Download: Smallwood Phd thesis 2009.pdf (11.52 MB)
Nichol, SL, Brooke BP.  2011.  Shelf habitat distribution as a legacy of Late Quaternary marine transgressions: A case study from a tropical carbonate province. Continental Shelf Research. 31(17):1845-1857. Abstract
Lowe, RJ, Ivey GN, Brinkman RM, Jones NL.  2012.  Seasonal circulation and temperature variability near the North West Cape of Australia. Journal of Geophysical Research. 117(C4) Abstract
Johansson, CL, Bellwood DR, Depczynski M.  2010.  Sea urchins, macroalgae and coral reef decline: a functional evaluation of an intact reef system, Ningaloo, Western Australia. Marine Ecology Progress Series. 414:65-74. Abstract
Speed, CW, Meekan MG, Rowat D, Pierce SJ, Marshall AD, Bradshaw CJA.  2008.  Scarring patterns and relative mortality rates of Indian Ocean whale sharks. Journal of Fish Biology. 72(6):1488-1503. Abstract
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Wilson, SK, Babcock RC, Fisher R, Holmes TH, Moore JAY, Thomson DP.  2012.  Relative and combined effects of habitat and fishing on reef fish communities across a limited fishing gradient at Ningaloo. Marine Environmental Research. 81:1-11.